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Basic Epidemic Metrics

Biology • Microbiology and Epidemiology

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Incidence uses new cases; prevalence uses existing cases.
Also reports percent when applicable.
Use the total or the at-risk population (be consistent).
Count new cases during the selected time window.
Cases present at a specific time point.
Anyone who had the condition at any time during the period.
Used for incidence labeling and (optionally) to compute person-time.
If you choose “Compute”, we convert your time window into the selected person-time unit.
Used only when CFR mode is selected.
Usually confirmed cases. (Not the population.)

Tip: For outbreaks, “attack rate” is the same formula as incidence proportion. For incidence rate, you need person-time (either enter it directly or compute N × time window).

Batch mode (paste CSV or upload file)
Paste rows and calculate many scenarios at once. Column names are flexible; a common header is shown below.
Batch: idle
Ready
Visualizations
Hover to see values • Wheel to zoom • Drag to pan • Double-click to reset
Population bar (affected portion)

This highlights an affected fraction like existing cases ÷ population (prevalence) or new cases ÷ population (incidence proportion).

Time ribbon (incidence window)

Incidence counts new cases during this window. For incidence rate, divide by person-time.

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Frequently Asked Questions

What is the difference between incidence and prevalence in this calculator?

Incidence uses new cases during a defined time window and reflects how fast cases are occurring. Prevalence uses existing cases at a time point (point prevalence) or anyone who had the condition during a period (period prevalence) and reflects burden.

How do you calculate incidence proportion (risk or attack rate)?

Incidence proportion is new cases divided by the at-risk population during the window: risk = C_new / N_risk. The tool can also scale it per K people and report percent.

How is incidence rate different from incidence proportion?

Incidence rate divides new cases by person-time: incidence rate = C_new / PT. It accounts for observation time and is reported per person-time unit, optionally scaled per 1,000 or 100,000 person-units.

How do I compute person-time if I do not have it measured directly?

For a simple closed cohort approximation, person-time can be estimated as PT ≈ N_risk x T. The calculator can compute this using your population and time window and convert it into person-days, weeks, months, or years.

What does case fatality ratio (CFR) measure?

CFR measures severity among identified cases: CFR = deaths among cases / total cases. It is not a population mortality rate because the denominator is cases, not the total population.